Variant report

Variant	rs73058611
Chromosome Location	chr3:179518179-179518180
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr3:179518120-179518320	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr3:179517342-179518427	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
ENSG00000270178	TF binding region

rs_ID	r²[population]
rs9832389	0.88[AFR][1000 genomes]
rs9847180	0.83[AFR][1000 genomes]
rs9850496	0.88[AFR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:179484600-179518600	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr3:179485000-179525200	Weak transcription	Brain Anterior Caudate	brain
3	chr3:179485200-179521200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr3:179486400-179518600	Weak transcription	NHDF-Ad	bronchial
5	chr3:179486400-179519600	Weak transcription	Hela-S3	cervix
6	chr3:179489600-179518800	Weak transcription	Brain Substantia Nigra	brain
7	chr3:179492400-179518800	Weak transcription	Osteobl	bone
8	chr3:179493800-179528200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr3:179498400-179528800	Weak transcription	Fetal Brain Male	brain
10	chr3:179500000-179524800	Weak transcription	Brain Hippocampus Middle	brain
11	chr3:179500400-179525200	Weak transcription	Brain Angular Gyrus	brain
12	chr3:179500600-179519000	Weak transcription	HSMM	muscle
13	chr3:179502000-179518400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr3:179503200-179518600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr3:179503800-179518600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr3:179504000-179518200	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr3:179504000-179518800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr3:179504000-179534800	Weak transcription	Fetal Brain Female	brain
19	chr3:179504000-179537400	Weak transcription	Brain Germinal Matrix	brain
20	chr3:179508000-179518400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr3:179508200-179519600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr3:179514800-179526200	Weak transcription	Thymus	Thymus
23	chr3:179517200-179518200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr3:179517400-179530000	Strong transcription	Dnd41	blood
25	chr3:179517800-179518400	Enhancers	Primary T cells from cord blood	blood
26	chr3:179518000-179519000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr3:179518000-179525200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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