Variant report

Variant rs73059378
Chromosome Location chr3:179754136-179754137
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179726000-179754200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:179750600-179755600 Active TSS Brain Inferior Temporal Lobe brain
3 chr3:179751400-179755400 Active TSS Brain Hippocampus Middle brain
4 chr3:179751400-179755600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr3:179752200-179755600 Active TSS Brain Angular Gyrus brain
6 chr3:179753200-179755800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
7 chr3:179753400-179754400 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
8 chr3:179753400-179754800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
9 chr3:179753400-179755000 Active TSS Dnd41 blood
10 chr3:179753400-179755200 Active TSS ES-WA7 Cell Line embryonic stem cell
11 chr3:179753400-179755200 Active TSS Brain Anterior Caudate brain
12 chr3:179753400-179755400 Active TSS H9 Cell Line embryonic stem cell
13 chr3:179753400-179755400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
14 chr3:179753400-179755400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
15 chr3:179753400-179755600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr3:179753400-179755600 Bivalent/Poised TSS Fetal Brain Female brain
17 chr3:179753600-179754200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
18 chr3:179753600-179754400 Flanking Active TSS Thymus Thymus
19 chr3:179753600-179754600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
20 chr3:179753600-179754600 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
21 chr3:179753600-179755400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
22 chr3:179753600-179755400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
23 chr3:179753600-179755400 Active TSS Pancreas Pancrea
24 chr3:179753600-179755600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
25 chr3:179753600-179755600 Active TSS Brain Cingulate Gyrus brain
26 chr3:179753800-179754200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
27 chr3:179753800-179754200 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
28 chr3:179753800-179754200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
29 chr3:179753800-179754400 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
30 chr3:179753800-179754400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
31 chr3:179753800-179754400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
32 chr3:179753800-179754600 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
33 chr3:179753800-179754800 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
34 chr3:179754000-179754200 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
35 chr3:179754000-179754200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
36 chr3:179754000-179754200 Flanking Bivalent TSS/Enh Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:179754000-179754200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr3:179754000-179754200 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
39 chr3:179754000-179754200 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
40 chr3:179754000-179754200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:179754000-179754200 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
42 chr3:179754000-179754200 Flanking Bivalent TSS/Enh Fetal Brain Male brain
43 chr3:179754000-179754200 Bivalent Enhancer Fetal Heart heart
44 chr3:179754000-179754200 Flanking Bivalent TSS/Enh Fetal Kidney kidney
45 chr3:179754000-179754200 Bivalent Enhancer Small Intestine intestine
46 chr3:179754000-179754400 Flanking Bivalent TSS/Enh H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr3:179754000-179754400 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
48 chr3:179754000-179754400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr3:179754000-179754400 Flanking Active TSS Brain Substantia Nigra brain
50 chr3:179754000-179754400 Flanking Active TSS Ovary ovary

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