Variant report

Variant	rs73073346
Chromosome Location	chr2:212764780-212764781
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73073339	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073354	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34128	chr2:212581485-212857122	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv834525	chr2:212693190-212860356	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv584323	chr2:212731514-212783175	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212759600-212764800	Weak transcription	Brain Anterior Caudate	brain
2	chr2:212760800-212766000	Weak transcription	Fetal Muscle Leg	muscle
3	chr2:212763600-212764800	Weak transcription	Fetal Kidney	kidney
4	chr2:212764600-212764800	Active TSS	Psoas Muscle	Psoas
5	chr2:212764600-212765000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:212764600-212765000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr2:212764600-212765000	Active TSS	Skeletal Muscle Female	skeletal muscle
8	chr2:212764600-212765200	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr2:212764600-212765200	Active TSS	Skeletal Muscle Male	skeletal muscle
10	chr2:212764600-212765400	Flanking Active TSS	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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