Variant report

Variant	rs73075867
Chromosome Location	chr12:30490422-30490423
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11832986	0.82[EUR][1000 genomes]
rs12307190	0.91[EUR][1000 genomes]
rs12308930	0.91[EUR][1000 genomes]
rs12320822	0.91[EUR][1000 genomes]
rs12322450	0.91[EUR][1000 genomes]
rs16906347	0.82[EUR][1000 genomes]
rs2351920	0.91[EUR][1000 genomes]
rs3866687	0.91[EUR][1000 genomes]
rs3866688	0.91[EUR][1000 genomes]
rs3885183	0.91[EUR][1000 genomes]
rs57573513	0.82[EUR][1000 genomes]
rs57982142	0.82[EUR][1000 genomes]
rs58192678	0.82[EUR][1000 genomes]
rs58759836	0.82[EUR][1000 genomes]
rs7132701	0.82[EUR][1000 genomes]
rs7487093	0.91[EUR][1000 genomes]
rs7954663	0.82[EUR][1000 genomes]
rs7974124	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832360	chr12:30393329-30555693	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv3343291	chr12:30455597-30992837	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
3	nsv558013	chr12:30478371-30491382	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
4	nsv558014	chr12:30478371-30492671	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:30490400-30490800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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