The 2.0 version of rSNPBase

Variant report

Variant rs73077875
Chromosome Location chr3:56807626-56807627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56764000-56815800 Weak transcription Fetal Intestine Small intestine
2 chr3:56792600-56809600 Weak transcription Small Intestine intestine
3 chr3:56793200-56817400 Weak transcription Hela-S3 cervix
4 chr3:56793600-56809600 Weak transcription Primary hematopoietic stem cells blood
5 chr3:56796600-56809800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr3:56796800-56809600 Weak transcription NHLF lung
7 chr3:56796800-56816400 Weak transcription Colonic Mucosa Colon
8 chr3:56797200-56809200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr3:56797600-56811400 Weak transcription Stomach Mucosa stomach
10 chr3:56799000-56815800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:56800800-56808200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:56800800-56809000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr3:56801600-56808200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr3:56802600-56811800 Strong transcription Dnd41 blood
15 chr3:56802800-56808000 Strong transcription HMEC breast
16 chr3:56803200-56808600 Strong transcription Fetal Stomach stomach
17 chr3:56803200-56809200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:56803200-56809600 Strong transcription Thymus Thymus
19 chr3:56803400-56810400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:56803600-56809600 Weak transcription Fetal Kidney kidney
21 chr3:56804000-56809000 Weak transcription Brain Substantia Nigra brain
22 chr3:56804200-56809000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr3:56804200-56809600 Weak transcription Brain Angular Gyrus brain
24 chr3:56804200-56809600 Weak transcription Right Atrium heart
25 chr3:56804200-56810000 Strong transcription Fetal Thymus thymus
26 chr3:56804200-56810000 Weak transcription Psoas Muscle Psoas
27 chr3:56804600-56808000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:56804600-56808000 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr3:56804600-56808000 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr3:56804600-56808200 Strong transcription Primary B cells from peripheral blood blood
31 chr3:56804600-56810200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:56805200-56807800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr3:56805200-56807800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr3:56805200-56808000 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr3:56805200-56808200 Strong transcription Placenta Placenta
36 chr3:56805400-56807800 Strong transcription Colon Smooth Muscle Colon
37 chr3:56805400-56807800 Genic enhancers GM12878-XiMat blood
38 chr3:56805400-56808400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr3:56805600-56807800 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr3:56805600-56808200 Strong transcription Primary B cells from cord blood blood
41 chr3:56805600-56809800 Strong transcription HepG2 liver
42 chr3:56805800-56808200 Enhancers HSMMtube muscle
43 chr3:56805800-56808600 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr3:56805800-56809400 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr3:56805800-56809400 Weak transcription Brain Germinal Matrix brain
46 chr3:56805800-56809800 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr3:56805800-56816800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:56806000-56809000 Strong transcription Primary T cells from cord blood blood
49 chr3:56806000-56809400 Weak transcription Rectal Smooth Muscle rectum
50 chr3:56806200-56808400 Strong transcription Primary T helper cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015