Variant report

Variant	rs73079712
Chromosome Location	chr1:214701511-214701512
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:214677154..214678655-chr1:214700789..214703552,2	MCF-7	breast:

rs_ID	r²[population]
rs17023147	0.81[AFR][1000 genomes]
rs17023152	0.96[AFR][1000 genomes]
rs41320948	0.96[AFR][1000 genomes]
rs56688885	0.96[AFR][1000 genomes]
rs73077997	0.86[AFR][1000 genomes]

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214665400-214705400	Weak transcription	Right Ventricle	heart
2	chr1:214688400-214706200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:214688400-214710600	Weak transcription	Spleen	Spleen
4	chr1:214690600-214705600	Weak transcription	Ovary	ovary
5	chr1:214690600-214705600	Weak transcription	Pancreas	Pancrea
6	chr1:214691400-214705600	Weak transcription	Placenta	Placenta
7	chr1:214692400-214710600	Weak transcription	HUVEC	blood vessel
8	chr1:214694400-214706400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr1:214694600-214705400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr1:214697400-214702400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr1:214697800-214706000	Weak transcription	Lung	lung
12	chr1:214698000-214704800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr1:214698800-214710800	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr1:214699000-214705400	Weak transcription	Fetal Intestine Small	intestine
15	chr1:214699200-214702400	Weak transcription	Primary T cells from cord blood	blood
16	chr1:214699200-214702600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr1:214699200-214702600	Enhancers	Osteobl	bone
18	chr1:214699200-214704600	Weak transcription	Rectal Smooth Muscle	rectum
19	chr1:214699200-214705600	Weak transcription	Gastric	stomach
20	chr1:214699200-214706200	Weak transcription	H1 Cell Line	embryonic stem cell
21	chr1:214699200-214706200	Weak transcription	Esophagus	oesophagus
22	chr1:214699200-214711400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
23	chr1:214699200-214711600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
24	chr1:214699200-214722000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr1:214699200-214722400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr1:214699400-214702600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr1:214699400-214704600	Weak transcription	Fetal Kidney	kidney
28	chr1:214699400-214704800	Weak transcription	Fetal Muscle Leg	muscle
29	chr1:214699400-214705400	Weak transcription	Fetal Stomach	stomach
30	chr1:214699400-214706000	Weak transcription	H9 Cell Line	embryonic stem cell
31	chr1:214699600-214702600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr1:214699600-214704800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr1:214699600-214705400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr1:214699600-214705400	Weak transcription	Fetal Muscle Trunk	muscle
35	chr1:214699800-214715200	Weak transcription	Stomach Mucosa	stomach
36	chr1:214700000-214704600	Weak transcription	Colon Smooth Muscle	Colon
37	chr1:214700000-214704600	Weak transcription	HSMM	muscle
38	chr1:214700000-214704800	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr1:214700000-214705400	Weak transcription	NHLF	lung
40	chr1:214700000-214706000	Weak transcription	Stomach Smooth Muscle	stomach
41	chr1:214700200-214702600	Weak transcription	HMEC	breast
42	chr1:214700200-214704000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr1:214700600-214702000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr1:214700600-214705400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr1:214700800-214702600	Weak transcription	Psoas Muscle	Psoas
46	chr1:214700800-214702600	Weak transcription	NHEK	skin
47	chr1:214700800-214704600	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr1:214700800-214706400	Weak transcription	Left Ventricle	heart
49	chr1:214700800-214711400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr1:214701000-214701600	Enhancers	Fetal Heart	heart

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