The 2.0 version of rSNPBase

Variant report

Variant rs73093552
Chromosome Location chr1:220762450-220762451
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220748200-220769200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:220748400-220767200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:220748400-220773200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:220748600-220769800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:220748800-220770400 Weak transcription Fetal Muscle Leg muscle
6 chr1:220749000-220767000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:220749800-220799000 Weak transcription Aorta Aorta
8 chr1:220750000-220767000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:220750400-220767000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:220751200-220763200 Weak transcription Fetal Brain Female brain
11 chr1:220751800-220799000 Weak transcription Fetal Stomach stomach
12 chr1:220752400-220762800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:220752400-220772200 Weak transcription Fetal Brain Male brain
14 chr1:220752400-220775000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:220752600-220764000 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:220752600-220768800 Weak transcription Esophagus oesophagus
17 chr1:220752600-220808600 Weak transcription Left Ventricle heart
18 chr1:220753000-220763200 Weak transcription Fetal Heart heart
19 chr1:220753200-220766400 Weak transcription HMEC breast
20 chr1:220753400-220778400 Weak transcription NHEK skin
21 chr1:220753800-220767000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:220754800-220764000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:220756000-220767000 Weak transcription Brain Germinal Matrix brain
24 chr1:220756000-220790800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:220756600-220767200 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:220756600-220775000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:220758000-220765800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:220761200-220764400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:220761200-220799200 Weak transcription H1 Cell Line embryonic stem cell
30 chr1:220761600-220767400 Weak transcription Right Ventricle heart
31 chr1:220762000-220771600 Weak transcription Stomach Smooth Muscle stomach
32 chr1:220762200-220762600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:220762200-220762600 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr1:220762200-220762600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:220762200-220763000 Enhancers HUVEC blood vessel
36 chr1:220762400-220762600 Flanking Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:220762400-220762600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:220762400-220762600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:220762400-220762600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr1:220762400-220762600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr1:220762400-220762600 ZNF genes & repeats Pancreas Pancrea
42 chr1:220762400-220762800 Enhancers Cortex derived primary cultured neurospheres brain
43 chr1:220762400-220762800 Enhancers HepG2 liver
44 chr1:220762400-220763000 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr1:220762400-220763000 Strong transcription Adipose Nuclei Adipose
46 chr1:220762400-220763800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015