Variant report
| Variant | rs73105238 |
|---|---|
| Chromosome Location | chr20:16629718-16629719 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:26)
| rs_ID | r2[population] |
|---|---|
| rs10485560 | 0.85[ASN][1000 genomes] |
| rs11698158 | 0.83[ASN][1000 genomes] |
| rs11698974 | 0.85[ASN][1000 genomes] |
| rs11699296 | 0.83[ASN][1000 genomes] |
| rs11699387 | 0.83[ASN][1000 genomes] |
| rs1962763 | 0.85[ASN][1000 genomes] |
| rs60228576 | 0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6080346 | 0.85[ASN][1000 genomes] |
| rs6080349 | 0.81[ASN][1000 genomes] |
| rs6080350 | 0.83[ASN][1000 genomes] |
| rs6080352 | 0.83[ASN][1000 genomes] |
| rs6080353 | 0.83[ASN][1000 genomes] |
| rs6080354 | 0.83[ASN][1000 genomes] |
| rs6080355 | 0.83[ASN][1000 genomes] |
| rs6080356 | 0.83[ASN][1000 genomes] |
| rs73103324 | 0.85[ASN][1000 genomes] |
| rs73103378 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73105248 | 0.85[ASN][1000 genomes] |
| rs73105264 | 0.83[ASN][1000 genomes] |
| rs73105266 | 0.83[ASN][1000 genomes] |
| rs73105271 | 0.83[ASN][1000 genomes] |
| rs73105273 | 0.83[ASN][1000 genomes] |
| rs73105274 | 0.83[ASN][1000 genomes] |
| rs73105279 | 0.83[ASN][1000 genomes] |
| rs73105287 | 0.81[ASN][1000 genomes] |
| rs73108768 | 0.85[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:16629600-16632600 | Weak transcription | Fetal Brain Male | brain |
