Variant report

Variant	rs73105293
Chromosome Location	chr20:16642166-16642167
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10485560	0.90[ASN][1000 genomes]
rs11697065	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11698158	0.93[ASN][1000 genomes]
rs11698974	0.90[ASN][1000 genomes]
rs11699089	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11699296	0.93[ASN][1000 genomes]
rs11699387	0.93[ASN][1000 genomes]
rs1962763	0.90[ASN][1000 genomes]
rs55719178	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6034565	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6080346	0.90[ASN][1000 genomes]
rs6080349	0.86[ASN][1000 genomes]
rs6080350	0.93[ASN][1000 genomes]
rs6080352	0.93[ASN][1000 genomes]
rs6080353	0.93[ASN][1000 genomes]
rs6080354	0.93[ASN][1000 genomes]
rs6080355	0.93[ASN][1000 genomes]
rs6080356	0.93[ASN][1000 genomes]
rs6135843	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73103324	0.90[ASN][1000 genomes]
rs73105248	0.90[ASN][1000 genomes]
rs73105264	0.93[ASN][1000 genomes]
rs73105266	0.93[ASN][1000 genomes]
rs73105271	0.93[ASN][1000 genomes]
rs73105273	0.93[ASN][1000 genomes]
rs73105274	0.93[ASN][1000 genomes]
rs73105279	0.93[ASN][1000 genomes]
rs73105287	0.90[ASN][1000 genomes]
rs73105295	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73108768	0.90[ASN][1000 genomes]
rs73109533	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73109535	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73109536	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73109538	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73109541	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16636400-16644200	Weak transcription	Fetal Brain Male	brain
2	chr20:16636600-16642400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr20:16640800-16644400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr20:16641600-16646800	Enhancers	Fetal Muscle Trunk	muscle
5	chr20:16641800-16642800	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr20:16641800-16643000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr20:16641800-16645800	Enhancers	Fetal Muscle Leg	muscle
8	chr20:16642000-16642800	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr20:16642000-16643400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr20:16642000-16643800	Enhancers	HSMMtube	muscle

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