Variant report

Variant	rs73107705
Chromosome Location	chr4:30399630-30399631
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs56921759	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60972058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61601196	1.00[AMR][1000 genomes]
rs61667977	1.00[AMR][1000 genomes]
rs73106300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73106302	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73109968	1.00[AMR][1000 genomes]
rs73111814	1.00[AMR][1000 genomes]
rs73111817	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878804	chr4:30162762-30412195	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv461315	chr4:30348053-30658535	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv593898	chr4:30348053-30658535	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv878805	chr4:30385756-30473099	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30398800-30399800	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr4:30398800-30400600	Enhancers	HUVEC	blood vessel
3	chr4:30399000-30399800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr4:30399000-30399800	Weak transcription	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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