Variant report

Variant	rs73110043
Chromosome Location	chr2:234149384-234149385
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:234148867..234150781-chr2:234159986..234161805,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000085978	Chromatin interaction

rs_ID	r²[population]
rs12471449	0.85[AFR][1000 genomes]
rs2083575	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2289473	0.96[EUR][1000 genomes]
rs3792095	0.81[EUR][1000 genomes]
rs58553066	0.84[AFR][1000 genomes]
rs73998327	0.96[EUR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:234138000-234151200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr2:234138400-234151200	Enhancers	Primary T cells fromperipheralblood	blood
3	chr2:234144200-234149400	Weak transcription	Stomach Mucosa	stomach
4	chr2:234144600-234150400	Weak transcription	Esophagus	oesophagus
5	chr2:234145400-234150600	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr2:234145600-234149400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr2:234145600-234151400	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr2:234145600-234152000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr2:234145600-234153600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr2:234146000-234149400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr2:234146000-234149400	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr2:234146000-234151200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr2:234146200-234149400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr2:234146200-234149400	Enhancers	Primary T killer memory cells from peripheral blood	blood
15	chr2:234146600-234149400	Enhancers	Primary T cells from cord blood	blood
16	chr2:234147000-234149400	Weak transcription	K562	blood
17	chr2:234147600-234151400	Enhancers	Primary B cells from peripheral blood	blood
18	chr2:234148000-234149600	Enhancers	GM12878-XiMat	blood
19	chr2:234148400-234149400	Weak transcription	Thymus	Thymus
20	chr2:234148400-234149400	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr2:234148400-234150400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
22	chr2:234148400-234151200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr2:234148400-234152200	Enhancers	Primary B cells from cord blood	blood
24	chr2:234148600-234150800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr2:234148600-234150800	Enhancers	Small Intestine	intestine
26	chr2:234148600-234151200	Enhancers	Fetal Thymus	thymus
27	chr2:234148800-234149400	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr2:234148800-234149400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
29	chr2:234149000-234150000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr2:234149200-234149400	Enhancers	Primary hematopoietic stem cells	blood
31	chr2:234149200-234149400	Enhancers	Placenta	Placenta
32	chr2:234149200-234149400	Enhancers	Spleen	Spleen
33	chr2:234149200-234149800	Enhancers	Sigmoid Colon	Sigmoid Colon
34	chr2:234149200-234150200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr2:234149200-234151400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
36	chr2:234149200-234151400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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