Variant report

Variant	rs73113470
Chromosome Location	chr4:31014441-31014442
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11935770	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11937701	0.83[AMR][1000 genomes]
rs11939049	0.83[AMR][1000 genomes]
rs12502649	0.83[AMR][1000 genomes]
rs12511624	0.80[AMR][1000 genomes]
rs12512723	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs12512727	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs58441575	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59407249	0.83[AMR][1000 genomes]
rs73113461	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73113466	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73113475	0.83[AMR][1000 genomes]
rs73113481	0.83[AMR][1000 genomes]
rs73113482	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv878811	chr4:30987395-31019279	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases
3	esv3401076	chr4:31013626-31015193	Weak transcription	n/a	n/a	inside rSNPs	n/a
4	esv3388732	chr4:31013654-31017252	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv3467047	chr4:31013818-31015078	Weak transcription	n/a	n/a	inside rSNPs	n/a
6	esv3467048	chr4:31013870-31015048	Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv3467046	chr4:31013874-31015043	Weak transcription	n/a	n/a	inside rSNPs	n/a
8	esv1008795	chr4:31013920-31015043	Weak transcription	n/a	n/a	inside rSNPs	n/a
9	nsv822516	chr4:31013920-31015043	Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3467049	chr4:31013934-31014977	Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv3467050	chr4:31013948-31014977	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30998000-31018000	Weak transcription	Aorta	Aorta
2	chr4:31009400-31022000	Weak transcription	Fetal Stomach	stomach
3	chr4:31013000-31018000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr4:31013200-31015200	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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