Variant report

Variant	rs73121577
Chromosome Location	chr12:60366639-60366640
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11837162	1.00[EUR][1000 genomes]
rs73119615	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869425	chr12:59746898-60479741	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
2	nsv516042	chr12:60354307-60459370	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:60365600-60367600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr12:60366000-60368200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr12:60366400-60368200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr12:60366400-60368200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:60366400-60368200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr12:60366400-60368400	Enhancers	HUVEC	blood vessel
7	chr12:60366600-60367000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr12:60366600-60367000	Flanking Active TSS	Hela-S3	cervix
9	chr12:60366600-60367000	Flanking Active TSS	HMEC	breast
10	chr12:60366600-60367000	Flanking Active TSS	NHEK	skin
11	chr12:60366600-60367800	Enhancers	NHLF	lung
12	chr12:60366600-60368000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr12:60366600-60368200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr12:60366600-60368200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr12:60366600-60368200	Enhancers	NH-A	brain
16	chr12:60366600-60368200	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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