Variant report

Variant	rs73124918
Chromosome Location	chr5:68245183-68245184
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs56994272	0.89[AFR][1000 genomes]
rs73124925	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73124946	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830332	chr5:68238288-68282681	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68242200-68250800	Enhancers	Fetal Lung	lung
2	chr5:68243000-68245200	Weak transcription	Adipose Nuclei	Adipose
3	chr5:68243400-68245400	Weak transcription	Fetal Heart	heart
4	chr5:68244400-68246400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr5:68245000-68245200	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr5:68245000-68246200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr5:68245000-68246400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr5:68245000-68247000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr5:68245000-68247000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
10	chr5:68245000-68247000	Enhancers	Left Ventricle	heart
11	chr5:68245000-68247000	Enhancers	Ovary	ovary
12	chr5:68245000-68247000	Enhancers	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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