Variant report

Variant	rs73129962
Chromosome Location	chr12:62544811-62544812
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs57237153	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73129961	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74098720	0.98[EUR][1000 genomes]
rs9705748	0.99[EUR][1000 genomes]
rs9739152	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832435	chr12:62407000-62601835	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62535800-62545000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr12:62538000-62545000	Weak transcription	Pancreas	Pancrea
3	chr12:62542400-62545000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr12:62544800-62545200	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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