Variant report

Variant	rs73135318
Chromosome Location	chr4:46493646-46493647
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16859425	1.00[AMR][1000 genomes]
rs73812863	1.00[AMR][1000 genomes]
rs7665962	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878995	chr4:46422329-46589847	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46493000-46496200	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr4:46493200-46495200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr4:46493200-46496400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr4:46493200-46496800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr4:46493400-46495000	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr4:46493600-46494000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr4:46493600-46494200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr4:46493600-46494800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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