Variant report

Variant	rs73136673
Chromosome Location	chr5:95983672-95983673
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:95982894..95985844-chr5:95986836..95989729,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs57652921	1.00[EUR][1000 genomes]
rs6887654	1.00[EUR][1000 genomes]
rs73134542	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030444	chr5:95353620-95995619	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
2	nsv537810	chr5:95353620-95995619	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1024964	chr5:95742124-96065492	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
4	nsv537811	chr5:95742124-96065492	Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:95975200-95983800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr5:95977000-95984400	Weak transcription	Esophagus	oesophagus
3	chr5:95980800-95988200	Weak transcription	Placenta	Placenta
4	chr5:95981200-95983800	Weak transcription	Fetal Kidney	kidney
5	chr5:95982400-95985000	Weak transcription	Small Intestine	intestine
6	chr5:95982800-95984400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr5:95982800-95986200	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr5:95982800-95989600	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr5:95983000-95984800	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr5:95983200-95986400	Enhancers	Rectal Mucosa Donor 29	rectum
11	chr5:95983200-95986600	Enhancers	Fetal Intestine Large	intestine
12	chr5:95983200-95994200	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr5:95983400-95984800	Enhancers	GM12878-XiMat	blood
14	chr5:95983400-95985400	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr5:95983400-95985600	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr5:95983400-95986200	Enhancers	Primary neutrophils fromperipheralblood	blood
17	chr5:95983400-95986200	Enhancers	Fetal Lung	lung
18	chr5:95983400-95986400	Enhancers	Rectal Mucosa Donor 31	rectum
19	chr5:95983600-95983800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
20	chr5:95983600-95984000	Enhancers	Duodenum Mucosa	Duodenum
21	chr5:95983600-95984200	Weak transcription	Psoas Muscle	Psoas
22	chr5:95983600-95985600	Enhancers	A549	lung
23	chr5:95983600-95986200	Enhancers	Fetal Intestine Small	intestine

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