Variant report

Variant	rs7314107
Chromosome Location	chr12:117856585-117856586
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11829681	1.00[AFR][1000 genomes]
rs57719099	1.00[AMR][1000 genomes]
rs58264841	1.00[AMR][1000 genomes]
rs59689997	1.00[AMR][1000 genomes]
rs60330472	1.00[AMR][1000 genomes]
rs60346882	1.00[AMR][1000 genomes]
rs7958498	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv560386	chr12:117822187-117991547	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117846600-117859800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr12:117855400-117860400	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr12:117855400-117868600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr12:117855600-117858800	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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