The 2.0 version of rSNPBase

Variant report

Variant rs7314534
Chromosome Location chr12:47627404-47627405
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:47583200-47628600 Weak transcription Aorta Aorta
2 chr12:47601800-47628400 Weak transcription Esophagus oesophagus
3 chr12:47610400-47628400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr12:47612400-47628400 Weak transcription Placenta Placenta
5 chr12:47617200-47628400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr12:47617200-47628400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr12:47617200-47629000 Weak transcription NHEK skin
8 chr12:47617800-47628400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:47617800-47628400 Weak transcription Spleen Spleen
10 chr12:47617800-47629400 Weak transcription Stomach Smooth Muscle stomach
11 chr12:47617800-47631600 Weak transcription Small Intestine intestine
12 chr12:47617800-47632800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr12:47618000-47627800 Genic enhancers Primary T helper cells fromperipheralblood blood
14 chr12:47618000-47628400 Weak transcription HMEC breast
15 chr12:47618000-47629000 Weak transcription Adipose Nuclei Adipose
16 chr12:47618000-47629400 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr12:47618600-47630000 Weak transcription HSMM muscle
18 chr12:47618600-47638600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr12:47619000-47628400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr12:47619000-47632800 Weak transcription H1 Cell Line embryonic stem cell
21 chr12:47619000-47643600 Weak transcription Pancreas Pancrea
22 chr12:47619600-47627600 Genic enhancers Primary T helper cells PMA-I stimulated --
23 chr12:47620200-47630200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr12:47620200-47632800 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr12:47621200-47628400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr12:47623400-47631600 Strong transcription Primary B cells from peripheral blood blood
27 chr12:47624200-47630000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr12:47624600-47627600 Genic enhancers Primary T cells from cord blood blood
29 chr12:47624600-47627800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr12:47624800-47627600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
31 chr12:47625600-47629800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr12:47625600-47631600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr12:47625800-47628200 Weak transcription Ovary ovary
34 chr12:47625800-47628400 Genic enhancers Primary T killer naive cells fromperipheralblood blood
35 chr12:47625800-47628800 Weak transcription Muscle Satellite Cultured Cells --
36 chr12:47625800-47628800 Weak transcription Fetal Intestine Small intestine
37 chr12:47625800-47628800 Genic enhancers A549 lung
38 chr12:47625800-47629400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr12:47625800-47630000 Weak transcription HSMMtube muscle
40 chr12:47625800-47630400 Weak transcription Rectal Smooth Muscle rectum
41 chr12:47626000-47628800 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr12:47626200-47628800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr12:47626600-47630600 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr12:47626800-47627600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr12:47626800-47630200 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr12:47626800-47631000 Genic enhancers Primary T cells fromperipheralblood blood
47 chr12:47627000-47628400 Weak transcription Lung lung
48 chr12:47627000-47628600 Strong transcription Primary T killer memory cells from peripheral blood blood
49 chr12:47627200-47630200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr12:47627200-47630400 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015