Variant report

Variant	rs73145983
Chromosome Location	chr4:47926340-47926341
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs4695315	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447039	chr4:47822266-48285222	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
2	nsv1013947	chr4:47915527-48052824	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv537082	chr4:47915527-48052824	Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47923800-47926400	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr4:47924800-47928600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr4:47924800-47928800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:47924800-47928800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr4:47924800-47928800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:47925000-47928600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr4:47925000-47928600	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr4:47925000-47928800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr4:47925000-47928800	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr4:47925000-47928800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr4:47925000-47928800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr4:47925000-47928800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr4:47925000-47928800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr4:47925200-47928600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr4:47925200-47928800	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr4:47925600-47926400	Enhancers	Primary B cells from cord blood	blood
17	chr4:47925600-47927200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
18	chr4:47926000-47926400	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr4:47926000-47928600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr4:47926000-47928800	Weak transcription	GM12878-XiMat	blood
21	chr4:47926200-47928800	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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