The 2.0 version of rSNPBase

Variant report

Variant rs73149285
Chromosome Location chr4:54188683-54188684
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54169800-54216200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:54170600-54230600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:54172600-54215400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr4:54174200-54212600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr4:54180000-54193200 Weak transcription GM12878-XiMat blood
6 chr4:54180000-54212800 Weak transcription Primary B cells from cord blood blood
7 chr4:54187200-54189000 Enhancers Fetal Lung lung
8 chr4:54187400-54188800 Enhancers HUES48 Cell Line embryonic stem cell
9 chr4:54187600-54189800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr4:54187800-54192200 Enhancers Liver Liver
11 chr4:54187800-54212800 Weak transcription Dnd41 blood
12 chr4:54188000-54189200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:54188000-54189200 Enhancers Stomach Mucosa stomach
14 chr4:54188000-54189400 Enhancers Duodenum Mucosa Duodenum
15 chr4:54188000-54189600 Enhancers HepG2 liver
16 chr4:54188000-54189800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr4:54188200-54189000 Weak transcription K562 blood
18 chr4:54188200-54189200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr4:54188200-54189200 Enhancers Muscle Satellite Cultured Cells --
20 chr4:54188200-54189200 Weak transcription Brain Angular Gyrus brain
21 chr4:54188200-54189200 Enhancers HSMMtube muscle
22 chr4:54188200-54189200 Enhancers NHLF lung
23 chr4:54188200-54189400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr4:54188200-54189400 Enhancers Hela-S3 cervix
25 chr4:54188200-54189400 Enhancers NH-A brain
26 chr4:54188200-54189600 Enhancers Osteobl bone
27 chr4:54188200-54190000 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr4:54188200-54190000 Enhancers HUVEC blood vessel
29 chr4:54188200-54195000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr4:54188200-54213800 Weak transcription Right Ventricle heart
31 chr4:54188200-54218200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr4:54188200-54231200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr4:54188400-54189800 Enhancers NHDF-Ad bronchial
34 chr4:54188400-54190600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr4:54188400-54190800 Weak transcription Spleen Spleen
36 chr4:54188400-54192800 Weak transcription HSMM muscle
37 chr4:54188400-54193200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr4:54188400-54193400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr4:54188400-54193600 Weak transcription Lung lung
40 chr4:54188400-54196000 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr4:54188400-54205600 Weak transcription Fetal Intestine Small intestine
42 chr4:54188400-54212800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr4:54188600-54189000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr4:54188600-54189200 Enhancers A549 lung
45 chr4:54188600-54190000 Weak transcription Left Ventricle heart
46 chr4:54188600-54193400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr4:54188600-54196800 Weak transcription Small Intestine intestine
48 chr4:54188600-54202800 Weak transcription Primary T cells from cord blood blood
49 chr4:54188600-54215400 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015