Variant report

Variant	rs73151495
Chromosome Location	chr3:101923830-101923831
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs62274667	1.00[AMR][1000 genomes]
rs62274719	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497784	chr3:101315009-102092989	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101914800-101925600	Weak transcription	Aorta	Aorta
2	chr3:101919800-101924800	Weak transcription	Osteobl	bone
3	chr3:101920000-101924200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr3:101920000-101924200	Weak transcription	NHEK	skin
5	chr3:101920000-101924400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr3:101920000-101924600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr3:101920000-101925000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr3:101920000-101925200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr3:101920400-101924200	Weak transcription	HMEC	breast
10	chr3:101923600-101925200	Weak transcription	Muscle Satellite Cultured Cells	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links