Variant report

Variant	rs73156211
Chromosome Location	chr7:100183930-100183931
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:422)
CpG islands
(count:61)
Chromatin interactive
region (count:51)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:422 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr7:100183365-100184051	PANC-1	pancreas:	n/a	n/a
2	CHD2	chr7:100183475-100184415	HepG2	liver:	n/a	n/a
3	SP4	chr7:100183177-100184481	H1-hESC	embryonic stem cell:	n/a	chr7:100183411-100183422
4	POLR2A	chr7:100183356-100184392	PBDE	blood:	n/a	n/a
5	REST	chr7:100182575-100184900	H1-neurons	neurons:	n/a	chr7:100182669-100182678 chr7:100184463-100184481 chr7:100182965-100182983
6	CREB1	chr7:100183483-100184510	HepG2	liver:	n/a	n/a
7	POLR2A	chr7:100183354-100184658	HUVEC	blood vessel:	n/a	n/a
8	MXI1	chr7:100182097-100184976	IMR90	lung:	n/a	n/a
9	EGR1	chr7:100183632-100183991	GM12878	blood:	n/a	chr7:100183775-100183789 chr7:100183810-100183824
10	THAP1	chr7:100183922-100184311	K562	blood:	n/a	n/a
11	YY1	chr7:100183496-100183998	ECC-1	luminal epithelium:	n/a	n/a
12	IRF3	chr7:100183825-100184369	HepG2	liver:	n/a	chr7:100183875-100183884
13	BRCA1	chr7:100183537-100184289	HepG2	liver:	n/a	n/a
14	SIX5	chr7:100183367-100184352	A549	lung:	n/a	n/a
15	RELA	chr7:100183580-100184372	GM19099	blood:	n/a	n/a
16	CREB1	chr7:100183388-100184500	A549	lung:	n/a	n/a
17	POLR2A	chr7:100183372-100184994	SK-N-MC	brain:	n/a	n/a
18	GABPA	chr7:100183510-100184390	A549	lung:	n/a	n/a
19	TBL1XR1	chr7:100183356-100184384	K562	blood:	n/a	n/a
20	POLR2A	chr7:100183323-100184535	GM19099	blood:	n/a	n/a
21	SIN3AK20	chr7:100183606-100183930	SK-N-SH	brain:	n/a	n/a
22	ETS1	chr7:100183342-100184019	K562	blood:	n/a	n/a
23	ZEB1	chr7:100182146-100184048	GM12878	blood:	n/a	chr7:100183211-100183218 chr7:100183232-100183243 chr7:100183231-100183243 chr7:100182601-100182608 chr7:100182599-100182611 chr7:100182600-100182611
24	POLR2A	chr7:100183162-100184902	MCF-7	breast:	n/a	n/a
25	EP300	chr7:100183564-100184209	HepG2	liver:	n/a	chr7:100183986-100184002
26	CREB1	chr7:100183444-100184517	H1-hESC	embryonic stem cell:	n/a	n/a
27	ETS1	chr7:100183652-100183940	A549	lung:	n/a	n/a
28	RELA	chr7:100183442-100184447	GM18951	blood:	n/a	n/a
29	CEBPB	chr7:100183465-100184133	GM12878	blood:	n/a	n/a
30	FOS	chr7:100183478-100184452	K562	blood:	n/a	chr7:100183877-100183886
31	POLR2A	chr7:100183264-100184669	MCF-7	breast:	n/a	n/a
32	SP1	chr7:100183168-100184425	H1-hESC	embryonic stem cell:	n/a	chr7:100183411-100183422 chr7:100183874-100183895 chr7:100183766-100183780 chr7:100183776-100183786 chr7:100183216-100183228 chr7:100183777-100183786 chr7:100183776-100183790 chr7:100183213-100183227 chr7:100183216-100183228 chr7:100183770-100183784 chr7:100183218-100183227
33	POLR2A	chr7:100183283-100184524	GM18526	blood:	n/a	n/a
34	E2F4	chr7:100183301-100184283	K562	blood:	n/a	chr7:100183875-100183884
35	IRF1	chr7:100183231-100184488	K562	blood:	n/a	chr7:100183875-100183884
36	TAF1	chr7:100183402-100184163	HepG2	liver:	n/a	n/a
37	SIX5	chr7:100183592-100184293	A549	lung:	n/a	n/a
38	ELK1	chr7:100183500-100184301	GM12878	blood:	n/a	n/a
39	NFE2	chr7:100183694-100183988	GM12878	blood:	n/a	n/a
40	ELF1	chr7:100183377-100184421	GM12878	blood:	n/a	n/a
41	MXI1	chr7:100183513-100184323	K562	blood:	n/a	n/a
42	ATF2	chr7:100183625-100184344	H1-hESC	embryonic stem cell:	n/a	n/a
43	EP300	chr7:100183288-100184075	H1-hESC	embryonic stem cell:	n/a	chr7:100183986-100184002
44	POLR2A	chr7:100183032-100184454	MCF10A-Er-Src	breast:	n/a	n/a
45	POLR2A	chr7:100183403-100184506	HUVEC	blood vessel:	n/a	n/a
46	REST	chr7:100183453-100184437	SK-N-SH	brain:	n/a	n/a
47	FOXP2	chr7:100183645-100184280	SK-N-MC	brain:	n/a	n/a
48	PAX5	chr7:100183371-100184434	GM12878	blood:	n/a	n/a
49	ELF1	chr7:100183628-100184350	HepG2	liver:	n/a	n/a
50	MYC	chr7:100183485-100184831	NB4	blood:	n/a	chr7:100184537-100184547

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:100183910-100183960	MCF-7	breast:	n/a
2	chr7:100183910-100183960	T-47D	breast:	n/a
3	chr7:100183910-100183960	HNPCEpiC	eye:	n/a
4	chr7:100183910-100183960	GM19239	blood:	n/a
5	chr7:100183910-100183960	HCPEpiC	choroid plexus:	n/a
6	chr7:100183910-100183960	AG10803	skin:	n/a
7	chr7:100183910-100183960	HCM	heart:	n/a
8	chr7:100183910-100183960	ovcar-3	ovarian:	n/a
9	chr7:100183910-100183960	GM12878	blood:	n/a
10	chr7:100183910-100183960	PANC-1	pancreas:	n/a
11	chr7:100183910-100183960	K562	blood:	n/a
12	chr7:100183910-100183960	HPAEpiC	pulmonary alveolar:	n/a
13	chr7:100183910-100183960	HCF	heart:	n/a
14	chr7:100183910-100183960	HepG2	liver:	n/a
15	chr7:100183910-100183960	NHDF-neo	bronchial:	n/a
16	chr7:100183910-100183960	SK-N-SH	brain:	n/a
17	chr7:100183910-100183960	PrEC	prostate:	n/a
18	chr7:100183910-100183960	SKMC	muscle:	n/a
19	chr7:100183910-100183960	SK-N-MC	brain:	n/a
20	chr7:100183910-100183960	ECC-1	luminal epithelium:	n/a
21	chr7:100183910-100183960	Caco-2	colon:	n/a
22	chr7:100183910-100183960	H1-hESC	embryonic stem cell:	embryo
23	chr7:100183910-100183960	LNCaP	prostate:	n/a
24	chr7:100183910-100183960	PFSK-1	brain:	n/a
25	chr7:100183910-100183960	BE2_C	brain:	n/a
26	chr7:100183910-100183960	RPTEC	kidney:	n/a
27	chr7:100183910-100183960	AG09309	skin:	n/a
28	chr7:100183910-100183960	NHBE	bronchial:	n/a
29	chr7:100183910-100183960	SAEC	small airway:	n/a
30	chr7:100183910-100183960	HEK293	kidney:	embryo
31	chr7:100183910-100183960	Hepatocyte	liver:	n/a
32	chr7:100183910-100183960	NT2-D1	testis:	n/a
33	chr7:100183910-100183960	ProgFib	skin:	n/a
34	chr7:100183910-100183960	HRPEpiC	eye:	n/a
35	chr7:100183910-100183960	HL-60	blood:	n/a
36	chr7:100183910-100183960	HMEC	breast:	n/a
37	chr7:100183910-100183960	HEEpiC	esophagus:	n/a
38	chr7:100183910-100183960	HUVEC	blood vessel:	n/a
39	chr7:100183910-100183960	AG04449	skin:	fetal
40	chr7:100183910-100183960	HCT-116	colon:	n/a
41	chr7:100183910-100183960	AoSMC	blood vessel:	n/a
42	chr7:100183910-100183960	A549	lung:	n/a
43	chr7:100183910-100183960	SK-N-SH_RA	brain:	n/a
44	chr7:100183910-100183960	GM06990	blood:	n/a
45	chr7:100183910-100183960	CMK	blood:	n/a
46	chr7:100183910-100183960	AG09319	gingival:	n/a
47	chr7:100183910-100183960	NB4	blood:	n/a
48	chr7:100183910-100183960	Jurkat	blood:	n/a
49	chr7:100183910-100183960	HAEpiC	amniotic membrane:	n/a
50	chr7:100183910-100183960	HRCEpiC	kidney:	n/a

(count:51 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:100182236..100184425-chr7:100238898..100241261,2	MCF-7	breast:
2	chr11:65264056..65266842-chr7:100182390..100184760,2	MCF-7	breast:
3	chr7:100080695..100082892-chr7:100181914..100185450,4	MCF-7	breast:
4	chr7:100181910..100186072-chr7:100207984..100213440,10	MCF-7	breast:
5	chr7:100182175..100185247-chr7:100208524..100211802,7	K562	blood:
6	chr21:27542363..27543224-chr7:100183508..100184057,2	Hela-S3	cervix:
7	chr19:10443632..10444304-chr7:100182999..100183931,2	NB4	blood:
8	chr19:55918814..55919439-chr7:100183201..100184234,3	NB4	blood:
9	chr7:100180263..100184567-chr7:100269497..100273047,5	K562	blood:
10	chr7:100183452..100184006-chr7:100273102..100273634,2	MCF-7	breast:
11	chr7:100183091..100185790-chr7:100237185..100241212,3	K562	blood:
12	chr7:100179326..100185857-chr7:100269460..100275597,19	MCF-7	breast:
13	chr7:100180934..100186212-chr7:100208003..100211666,10	K562	blood:
14	chr17:59476334..59478740-chr7:100183272..100185013,2	MCF-7	breast:
15	chr7:100182086..100185168-chr7:100253147..100256450,3	MCF-7	breast:
16	chr7:100183793..100184708-chr7:100209218..100210071,2	K562	blood:
17	chr7:66767046..66767663-chr7:100183572..100184132,3	Hela-S3	cervix:
18	chr7:100181058..100187386-chr7:100198846..100203499,12	K562	blood:
19	chr7:100075021..100078361-chr7:100180649..100185937,5	MCF-7	breast:
20	chr7:100136348..100138859-chr7:100182557..100185063,3	MCF-7	breast:
21	chr7:100024516..100026521-chr7:100183469..100186366,2	MCF-7	breast:
22	chr7:100182178..100184822-chr7:100229744..100231921,2	K562	blood:
23	chr15:43028764..43029357-chr7:100183650..100184158,2	Hela-S3	cervix:
24	chr1:110090821..110091757-chr7:100183155..100184054,2	Hela-S3	cervix:
25	chr2:85132594..85133142-chr7:100183276..100184086,2	Hela-S3	cervix:
26	chr12:56861842..56862390-chr7:100183413..100184019,2	NB4	blood:
27	chr7:100181873..100185085-chr7:100229346..100230888,3	MCF-7	breast:
28	chr7:100178369..100186125-chr7:100269651..100278553,26	MCF-7	breast:
29	chr7:100181018..100185569-chr7:100200264..100204023,6	MCF-7	breast:
30	chr7:100183091..100184798-chr7:100238306..100241212,2	K562	blood:
31	chr10:70231586..70232222-chr7:100183279..100184181,2	NB4	blood:
32	chr7:100031790..100034595-chr7:100181557..100184454,2	MCF-7	breast:
33	chr7:100024456..100030636-chr7:100180698..100187996,13	K562	blood:
34	chr22:43010972..43011894-chr7:100183249..100184019,2	NB4	blood:
35	chr7:100075632..100078427-chr7:100182362..100185442,6	K562	blood:
36	chr7:100183384..100184088-chr9:130829454..130830269,2	Hela-S3	cervix:
37	chr7:100075297..100078487-chr7:100182577..100184592,4	MCF-7	breast:
38	chr7:100182229..100186397-chr7:100301308..100304608,4	MCF-7	breast:
39	chr7:100182521..100184068-chr7:100470982..100473122,2	K562	blood:
40	chr7:100182211..100184849-chr7:100486903..100489190,3	MCF-7	breast:
41	chr7:100181605..100184428-chr7:100302112..100307493,7	MCF-7	breast:
42	chr7:100026775..100029248-chr7:100181334..100183939,2	MCF-7	breast:
43	chr7:100024988..100028445-chr7:100180808..100186978,10	K562	blood:
44	chr7:100024997..100029018-chr7:100182448..100185836,5	MCF-7	breast:
45	chr7:100182617..100185782-chr7:100284570..100287283,3	MCF-7	breast:
46	chr7:100135868..100137929-chr7:100182760..100184864,2	K562	blood:
47	chr7:100134485..100137368-chr7:100183364..100186308,2	K562	blood:
48	chr7:100181574..100184448-chr7:100269546..100273047,4	K562	blood:
49	chr7:100181643..100184250-chr7:100471958..100474283,2	MCF-7	breast:
50	chr7:100183417..100185001-chr7:100424655..100427018,2	K562	blood:

No data

Variant related genes	Relation type
LRCH4	TF binding region
FBXO24	TF binding region
FBXO24	CpG island
LRCH4	CpG island
ENSG00000106333	Chromatin interaction
ENSG00000078487	Chromatin interaction
ENSG00000176422	Chromatin interaction
ENSG00000172336	Chromatin interaction
ENSG00000171169	Chromatin interaction
ENSG00000172354	Chromatin interaction
ENSG00000166924	Chromatin interaction
ENSG00000121068	Chromatin interaction
ENSG00000142192	Chromatin interaction
ENSG00000240211	Chromatin interaction
ENSG00000108106	Chromatin interaction
ENSG00000161847	Chromatin interaction
ENSG00000065135	Chromatin interaction
ENSG00000273492	Chromatin interaction
ENSG00000267280	Chromatin interaction
ENSG00000267131	Chromatin interaction
ENSG00000176125	Chromatin interaction
ENSG00000270022	Chromatin interaction
ENSG00000160813	Chromatin interaction
ENSG00000138346	Chromatin interaction
ENSG00000067601	Chromatin interaction
ENSG00000106330	Chromatin interaction
ENSG00000034510	Chromatin interaction
ENSG00000270117	Chromatin interaction
ENSG00000077080	Chromatin interaction
ENSG00000140326	Chromatin interaction
ENSG00000241357	Chromatin interaction
ENSG00000146830	Chromatin interaction
ENSG00000224729	Chromatin interaction
ENSG00000146834	Chromatin interaction
ENSG00000251562	Chromatin interaction
ENSG00000106351	Chromatin interaction
ENSG00000106327	Chromatin interaction
ENSG00000087087	Chromatin interaction
ENSG00000266372	Chromatin interaction
ENSG00000196411	Chromatin interaction
ENSG00000166925	Chromatin interaction
ENSG00000106610	Chromatin interaction

Extended variants
information (count: 44 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11972116	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11977607	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11978096	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11978967	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12154919	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12216707	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2406243	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34440977	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56307653	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58509206	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60668677	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60743967	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61309832	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61318457	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67147615	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67535650	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6970240	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154884	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154887	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154891	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154894	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154895	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154897	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73154902	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73156207	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73156208	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73156210	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73711133	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73711136	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73711137	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7784759	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7799695	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1829095	chr7:99814675-100494084	Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	393 gene(s)	inside rSNPs	diseases
2	nsv888776	chr7:100014711-100198386	Flanking Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	297 gene(s)	inside rSNPs	diseases
3	nsv888777	chr7:100014711-100221867	Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
4	nsv888778	chr7:100014711-100236593	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
5	nsv888779	chr7:100014711-100313420	Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	321 gene(s)	inside rSNPs	diseases
6	nsv888780	chr7:100032665-100198386	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
7	nsv888782	chr7:100064719-100236593	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
8	nsv888785	chr7:100141861-100313420	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
9	nsv888786	chr7:100159567-100313420	Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
10	nsv888788	chr7:100161557-100186066	Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	52 gene(s)	inside rSNPs	diseases
11	nsv831072	chr7:100162503-100362835	Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
12	nsv5868	chr7:100169998-100214646	Strong transcription Active TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	59 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs73156211	SAP25	cis	Thyroid	GTEx
rs73156211	SAP25	cis	Nerve Tibial	GTEx
rs73156211	SAP25	cis	Esophagus Muscularis	GTEx
rs73156211	LRCH4	cis	Esophagus Muscularis	GTEx
rs73156211	SAP25	cis	Artery Tibial	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:100181200-100184600	Active TSS	Primary T cells from cord blood	blood
2	chr7:100181200-100185000	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr7:100181600-100184800	Active TSS	Small Intestine	intestine
4	chr7:100181800-100184800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
5	chr7:100181800-100184800	Active TSS	Lung	lung
6	chr7:100181800-100185000	Active TSS	H9 Cell Line	embryonic stem cell
7	chr7:100181800-100185000	Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr7:100181800-100185000	Active TSS	Pancreatic Islets	Pancreatic Islet
9	chr7:100182000-100184600	Active TSS	HSMM	muscle
10	chr7:100182000-100184800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr7:100182400-100185000	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr7:100182400-100185000	Active TSS	Fetal Kidney	kidney
13	chr7:100182600-100184600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
14	chr7:100182600-100184800	Active TSS	Gastric	stomach
15	chr7:100182600-100185000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr7:100182600-100185000	Active TSS	iPS-15b Cell Line	embryonic stem cell
17	chr7:100182600-100185000	Active TSS	Ovary	ovary
18	chr7:100182600-100185000	Active TSS	NHLF	lung
19	chr7:100182800-100184200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr7:100182800-100184400	Active TSS	Placenta	Placenta
21	chr7:100182800-100184600	Active TSS	Primary T killer naive cells fromperipheralblood	blood
22	chr7:100182800-100184600	Active TSS	HSMMtube	muscle
23	chr7:100182800-100184800	Active TSS	Pancreas	Pancrea
24	chr7:100182800-100184800	Active TSS	Sigmoid Colon	Sigmoid Colon
25	chr7:100182800-100185000	Active TSS	H1 Cell Line	embryonic stem cell
26	chr7:100182800-100185000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr7:100182800-100185000	Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr7:100182800-100185000	Active TSS	HUES64 Cell Line	embryonic stem cell
29	chr7:100182800-100185000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr7:100182800-100185000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr7:100182800-100185000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
32	chr7:100182800-100185000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr7:100182800-100185000	Active TSS	Fetal Intestine Large	intestine
34	chr7:100182800-100185000	Active TSS	Thymus	Thymus
35	chr7:100182800-100185000	Active TSS	NHDF-Ad	bronchial
36	chr7:100182800-100185200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr7:100183000-100184400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr7:100183000-100184600	Active TSS	Primary monocytes fromperipheralblood	blood
39	chr7:100183000-100184600	Active TSS	Primary T helper naive cells from peripheral blood	blood
40	chr7:100183000-100184600	Active TSS	Brain Inferior Temporal Lobe	brain
41	chr7:100183000-100184600	Active TSS	Fetal Stomach	stomach
42	chr7:100183000-100184600	Active TSS	Placenta Amnion	Placenta Amnion
43	chr7:100183000-100184800	Active TSS	Aorta	Aorta
44	chr7:100183000-100184800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr7:100183000-100184800	Active TSS	Fetal Intestine Small	intestine
46	chr7:100183000-100184800	Active TSS	Fetal Lung	lung
47	chr7:100183000-100184800	Active TSS	Left Ventricle	heart
48	chr7:100183000-100184800	Active TSS	Stomach Mucosa	stomach
49	chr7:100183000-100184800	Bivalent/Poised TSS	HepG2	liver
50	chr7:100183000-100185000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived

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