No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
esv2422452 |
chr12:72485933-73175581 |
Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv899257 |
chr12:72569746-73145896 |
ZNF genes & repeats Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv1044083 |
chr12:72647640-73275526 |
Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
20 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv469465 |
chr12:72655925-73259114 |
Weak transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
15 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv559363 |
chr12:72655925-73259114 |
Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
15 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv868884 |
chr12:72664763-73241518 |
Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv817280 |
chr12:72820558-73508605 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
8 |
esv2758314 |
chr12:72990707-73251109 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
9 |
esv2759908 |
chr12:72990707-73251109 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv868885 |
chr12:72998553-73587081 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv1048951 |
chr12:73018354-73151893 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv1052520 |
chr12:73018354-73181472 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
13 |
esv34457 |
chr12:73082433-73232340 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv2757510 |
chr12:73082470-73208048 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv44815 |
chr12:73083601-73083608 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|