Variant report

Variant	rs73158385
Chromosome Location	chr22:33308853-33308854
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11089599	0.82[AMR][1000 genomes]
rs11703516	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11703670	0.83[AMR][1000 genomes]
rs11703699	0.82[AMR][1000 genomes]
rs11703817	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11703888	0.85[AMR][1000 genomes]
rs11704480	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11704534	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11704887	0.85[AMR][1000 genomes]
rs11704993	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs137521	0.84[AFR][1000 genomes]
rs137559	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs137560	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs137561	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17779789	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2042793	0.83[AMR][1000 genomes]
rs25112	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4441575	0.85[AMR][1000 genomes]
rs5994648	0.83[AMR][1000 genomes]
rs5998677	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5998679	0.82[AMR][1000 genomes]
rs5998685	0.80[AMR][1000 genomes]
rs73158393	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73162010	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73162024	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73162026	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73162029	0.83[AMR][1000 genomes]
rs8139584	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8142585	0.85[AMR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33287800-33309600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr22:33287800-33312000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr22:33290000-33312000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr22:33307600-33309600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr22:33308000-33309600	Weak transcription	Brain Anterior Caudate	brain
6	chr22:33308000-33311600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr22:33308000-33311800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr22:33308000-33313000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr22:33308200-33310000	Weak transcription	Fetal Lung	lung
10	chr22:33308200-33313600	Weak transcription	Fetal Brain Male	brain

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