Variant report
Variant | rs73158532 |
---|---|
Chromosome Location | chr7:145385808-145385809 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:145378460..145381442-chr7:145382411..145386891,5 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000230746 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs13239005 | 0.94[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs34440983 | 0.94[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs34931759 | 0.94[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs34987698 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs36020157 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs66716113 | 0.94[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs67864570 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv831180 | chr7:145263906-145425845 | ZNF genes & repeats Enhancers Active TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
2 | esv2754040 | chr7:145303352-145698352 | Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
3 | esv2755386 | chr7:145303352-145698352 | Genic enhancers Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
4 | nsv511996 | chr7:145383882-145386044 | Inactive region | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |