Variant report

Variant	rs73165448
Chromosome Location	chr7:140349421-140349422
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:140348190..140349765-chr7:140371318..140374149,2	K562	blood:
2	chr7:140177847..140180773-chr7:140348014..140350420,2	K562	blood:

Variant related genes	Relation type
ENSG00000133606	Chromatin interaction
ENSG00000133597	Chromatin interaction
ENSG00000146966	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73163266	1.00[ASN][1000 genomes]
rs73163274	1.00[ASN][1000 genomes]
rs73163296	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831157	chr7:140241339-140426876	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:140341600-140353000	Weak transcription	Ovary	ovary
2	chr7:140341800-140349600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr7:140341800-140350200	Weak transcription	Left Ventricle	heart
4	chr7:140341800-140355800	Weak transcription	Right Atrium	heart
5	chr7:140347000-140351400	Weak transcription	Gastric	stomach
6	chr7:140347000-140355800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:140347200-140349600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr7:140347200-140353000	Weak transcription	Fetal Stomach	stomach
9	chr7:140347400-140351600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr7:140347400-140353000	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr7:140347400-140353000	Weak transcription	Brain Angular Gyrus	brain
12	chr7:140347400-140353000	Weak transcription	Brain Anterior Caudate	brain
13	chr7:140347400-140353000	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr7:140347600-140353000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr7:140347600-140353000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr7:140347600-140353000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr7:140347600-140353000	Weak transcription	Primary B cells from peripheral blood	blood
18	chr7:140347600-140353000	Weak transcription	Brain Cingulate Gyrus	brain
19	chr7:140347600-140353000	Weak transcription	Brain Hippocampus Middle	brain
20	chr7:140347600-140353000	Weak transcription	Colon Smooth Muscle	Colon
21	chr7:140347600-140353000	Weak transcription	Fetal Kidney	kidney
22	chr7:140347600-140353000	Weak transcription	Fetal Lung	lung
23	chr7:140347600-140353000	Weak transcription	NHLF	lung
24	chr7:140347600-140353200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr7:140347600-140353200	Weak transcription	Brain Substantia Nigra	brain
26	chr7:140347800-140353000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr7:140349000-140350400	Enhancers	Hela-S3	cervix
28	chr7:140349000-140351800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr7:140349000-140351800	Enhancers	NHEK	skin
30	chr7:140349200-140349600	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr7:140349200-140349600	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr7:140349200-140349600	Enhancers	Muscle Satellite Cultured Cells	--
33	chr7:140349200-140349600	Enhancers	Monocytes-CD14+_RO01746	blood
34	chr7:140349200-140349800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr7:140349200-140349800	Enhancers	HSMMtube	muscle
36	chr7:140349200-140350000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr7:140349200-140350000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr7:140349200-140350000	Enhancers	NH-A	brain
39	chr7:140349200-140350600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr7:140349200-140350600	Enhancers	Right Ventricle	heart
41	chr7:140349200-140351400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr7:140349200-140351600	Enhancers	A549	lung
43	chr7:140349200-140351800	Enhancers	HMEC	breast
44	chr7:140349200-140353400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr7:140349400-140349600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
46	chr7:140349400-140349600	Enhancers	Osteobl	bone
47	chr7:140349400-140349800	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr7:140349400-140349800	Enhancers	HUVEC	blood vessel
49	chr7:140349400-140350000	Enhancers	Fetal Heart	heart
50	chr7:140349400-140351200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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