Variant report

Variant	rs73166609
Chromosome Location	chr3:146958073-146958074
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10513302	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10513303	0.81[EUR][1000 genomes]
rs11711255	0.82[EUR][1000 genomes]
rs11717071	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73164853	0.87[EUR][1000 genomes]
rs73164865	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73164872	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73164884	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3385588	chr3:146782324-147083081	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv460883	chr3:146889655-146960105	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv591966	chr3:146889655-146960105	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv591967	chr3:146889655-146964828	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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