The 2.0 version of rSNPBase

Variant report

Variant rs73169477
Chromosome Location chr13:39622617-39622618
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:39613000-39629000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:39613000-39636200 Weak transcription Spleen Spleen
3 chr13:39613200-39626600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr13:39613200-39636400 Weak transcription Gastric stomach
5 chr13:39613200-39637200 Weak transcription Pancreas Pancrea
6 chr13:39613200-39647000 Weak transcription Left Ventricle heart
7 chr13:39613200-39647200 Weak transcription Lung lung
8 chr13:39613400-39625000 Weak transcription HSMMtube muscle
9 chr13:39613400-39646600 Weak transcription Aorta Aorta
10 chr13:39613600-39623400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr13:39613600-39625200 Weak transcription NHLF lung
12 chr13:39613600-39626600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr13:39613600-39626600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr13:39613600-39629000 Weak transcription Stomach Smooth Muscle stomach
15 chr13:39613600-39629200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr13:39613600-39629800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr13:39613800-39623200 Weak transcription HMEC breast
18 chr13:39613800-39627000 Weak transcription Brain Substantia Nigra brain
19 chr13:39613800-39639200 Weak transcription Fetal Stomach stomach
20 chr13:39614000-39625400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr13:39614000-39627000 Weak transcription Brain Cingulate Gyrus brain
22 chr13:39614000-39627000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr13:39614000-39628400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:39614000-39634400 Weak transcription Fetal Kidney kidney
25 chr13:39614400-39644000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr13:39614600-39623800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr13:39615000-39625000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr13:39615000-39625800 Weak transcription Colon Smooth Muscle Colon
29 chr13:39615000-39626600 Weak transcription Duodenum Mucosa Duodenum
30 chr13:39615000-39627000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr13:39615000-39628600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr13:39615000-39629800 Weak transcription Brain Germinal Matrix brain
33 chr13:39615000-39634400 Weak transcription Fetal Brain Male brain
34 chr13:39615000-39636200 Weak transcription Fetal Intestine Small intestine
35 chr13:39615000-39638200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr13:39615200-39627000 Weak transcription K562 blood
37 chr13:39615200-39631600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr13:39615200-39637600 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr13:39615400-39627800 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr13:39615600-39623400 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr13:39617000-39624600 Strong transcription Primary monocytes fromperipheralblood blood
42 chr13:39617200-39628800 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr13:39617800-39623000 Strong transcription Primary T cells from cord blood blood
44 chr13:39618200-39629200 Weak transcription NHDF-Ad bronchial
45 chr13:39618600-39623200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr13:39618600-39643800 Weak transcription Ovary ovary
47 chr13:39618800-39626600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr13:39618800-39627000 Weak transcription NHEK skin
49 chr13:39619000-39626800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr13:39619200-39627000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015