The 2.0 version of rSNPBase

Variant report

Variant rs73177979
Chromosome Location chr12:104500355-104500356
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104460000-104511800 Weak transcription Hela-S3 cervix
2 chr12:104460000-104526200 Weak transcription Colonic Mucosa Colon
3 chr12:104472400-104501200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr12:104477200-104508400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr12:104480000-104508400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr12:104481000-104500800 Weak transcription K562 blood
7 chr12:104482800-104508200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr12:104485000-104500800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr12:104486200-104503000 Weak transcription Small Intestine intestine
10 chr12:104489200-104502600 Weak transcription Psoas Muscle Psoas
11 chr12:104491000-104508600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:104492000-104512400 Weak transcription HMEC breast
13 chr12:104493200-104502200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr12:104493200-104512400 Weak transcription Rectal Smooth Muscle rectum
15 chr12:104493200-104514400 Weak transcription NHEK skin
16 chr12:104493400-104500800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr12:104493400-104502400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr12:104493400-104502600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr12:104493400-104502600 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr12:104493400-104502600 Weak transcription Dnd41 blood
21 chr12:104493400-104502800 Weak transcription A549 lung
22 chr12:104493400-104511800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr12:104493400-104513400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr12:104493400-104514400 Weak transcription Brain Substantia Nigra brain
25 chr12:104493400-104519200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr12:104493400-104519800 Weak transcription Placenta Amnion Placenta Amnion
27 chr12:104493600-104502600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr12:104493600-104505000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:104493600-104510800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr12:104493600-104517400 Weak transcription Right Ventricle heart
31 chr12:104493800-104515400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr12:104493800-104518400 Weak transcription Gastric stomach
33 chr12:104493800-104530600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr12:104494200-104502600 Weak transcription Colon Smooth Muscle Colon
35 chr12:104494200-104502800 Weak transcription Brain Anterior Caudate brain
36 chr12:104494200-104509200 Weak transcription Fetal Brain Male brain
37 chr12:104494400-104500800 Weak transcription Brain Cingulate Gyrus brain
38 chr12:104494400-104502600 Weak transcription Thymus Thymus
39 chr12:104494400-104508000 Weak transcription GM12878-XiMat blood
40 chr12:104494400-104513600 Weak transcription Brain Germinal Matrix brain
41 chr12:104494400-104514000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr12:104494400-104516200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr12:104494400-104516200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr12:104494400-104521000 Weak transcription Lung lung
45 chr12:104494400-104521200 Weak transcription Aorta Aorta
46 chr12:104494400-104522600 Weak transcription Spleen Spleen
47 chr12:104494600-104516000 Weak transcription Fetal Stomach stomach
48 chr12:104494800-104505000 Weak transcription Brain Inferior Temporal Lobe brain
49 chr12:104494800-104508400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr12:104494800-104509000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015