Variant report

Variant	rs73195698
Chromosome Location	chr12:106670100-106670101
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:106641409..106644539-chr12:106668096..106670238,5	MCF-7	breast:
2	chr12:106649519..106651023-chr12:106669984..106671532,2	MCF-7	breast:
3	chr12:106634944..106646449-chr12:106667585..106679535,27	MCF-7	breast:
4	chr12:106664388..106667969-chr12:106668032..106670678,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258355	Chromatin interaction
ENSG00000136026	Chromatin interaction

rs_ID	r²[population]
rs10861568	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12313045	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73195700	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73197506	0.93[EUR][1000 genomes]

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:106665600-106670200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr12:106665800-106670800	Weak transcription	Fetal Heart	heart
3	chr12:106666200-106680800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr12:106666400-106670600	Weak transcription	NHEK	skin
5	chr12:106666600-106670400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr12:106666800-106670400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr12:106667600-106670400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr12:106668200-106670200	Enhancers	Sigmoid Colon	Sigmoid Colon
9	chr12:106668400-106671000	Enhancers	Esophagus	oesophagus
10	chr12:106668800-106670800	Enhancers	Primary B cells from peripheral blood	blood
11	chr12:106669200-106670600	Flanking Active TSS	GM12878-XiMat	blood
12	chr12:106669400-106670200	Enhancers	Primary B cells from cord blood	blood
13	chr12:106669400-106670800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:106669400-106670800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr12:106669600-106670800	Weak transcription	Primary neutrophils fromperipheralblood	blood
16	chr12:106669600-106670800	Weak transcription	Stomach Mucosa	stomach
17	chr12:106669600-106671200	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr12:106669600-106671800	Weak transcription	Rectal Mucosa Donor 29	rectum
19	chr12:106669600-106672800	Weak transcription	Liver	Liver
20	chr12:106669600-106673800	Weak transcription	Pancreatic Islets	Pancreatic Islet

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