Variant report

Variant	rs73202583
Chromosome Location	chr5:107287420-107287421
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:107285811..107288026-chr5:107290020..107292465,2	K562	blood:
2	chr5:107285431..107288026-chr5:107290064..107292465,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17160869	1.00[AMR][1000 genomes]
rs73204758	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882682	chr5:107213361-107458336	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:107273600-107287800	Weak transcription	Gastric	stomach
2	chr5:107274600-107290000	Weak transcription	Fetal Brain Female	brain
3	chr5:107283200-107294400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr5:107284400-107289200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr5:107284400-107290000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr5:107284400-107292600	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr5:107285200-107287600	Enhancers	Fetal Thymus	thymus
8	chr5:107285200-107287600	Enhancers	Thymus	Thymus
9	chr5:107285800-107288600	Enhancers	Primary T cells from cord blood	blood
10	chr5:107286000-107287800	Enhancers	Dnd41	blood
11	chr5:107286000-107290000	Weak transcription	NHDF-Ad	bronchial
12	chr5:107286600-107287600	Enhancers	Skeletal Muscle Female	skeletal muscle
13	chr5:107286800-107287600	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr5:107286800-107287600	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr5:107286800-107291000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr5:107287200-107292000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr5:107287400-107287600	Weak transcription	Pancreas	Pancrea
18	chr5:107287400-107290000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr5:107287400-107292000	Weak transcription	Primary T helper cells PMA-I stimulated	--
20	chr5:107287400-107294200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr5:107287400-107304600	Weak transcription	Aorta	Aorta
22	chr5:107287400-107308600	Weak transcription	Left Ventricle	heart

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