Variant report

Variant	rs73213808
Chromosome Location	chr7:116951485-116951486
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73213829	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73215909	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831108	chr7:116749534-116952011	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv608256	chr7:116928371-117040117	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116931800-116961600	Weak transcription	Placenta	Placenta
2	chr7:116936400-116952200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:116937000-116954800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr7:116945200-116954400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr7:116946800-116951600	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr7:116946800-116951800	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr7:116946800-116951800	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr7:116947600-116951600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr7:116950200-116952600	Genic enhancers	Fetal Lung	lung
10	chr7:116951000-116951800	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr7:116951200-116951800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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