Variant report

Variant	rs73221164
Chromosome Location	chr7:118910242-118910243
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:118902822..118906670-chr7:118907606..118911086,3	K562	blood:
2	chr7:118910007..118910665-chr7:120194855..120195659,2	MCF-7	breast:
3	chr7:118909733..118910708-chr7:145816212..145816735,2	MCF-7	breast:
4	chr7:118910028..118911067-chr7:119729751..119730686,4	MCF-7	breast:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs170100	0.86[EUR][1000 genomes]
rs308177	0.86[EUR][1000 genomes]
rs6967617	0.86[EUR][1000 genomes]
rs73207712	1.00[EUR][1000 genomes]
rs73207730	1.00[EUR][1000 genomes]
rs73207741	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73207743	1.00[EUR][1000 genomes]
rs73209852	1.00[EUR][1000 genomes]
rs73209854	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73217567	0.86[EUR][1000 genomes]
rs73221173	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889100	chr7:118744450-119247571	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv889101	chr7:118778802-119177670	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1019838	chr7:118843208-119031773	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1027982	chr7:118852364-119031773	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv608303	chr7:118853257-118970521	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv608304	chr7:118853257-118978523	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv608305	chr7:118853257-119027884	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv1028136	chr7:118859510-119007235	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv539096	chr7:118859510-119007235	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv534358	chr7:118866671-119014612	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv521831	chr7:118868426-119017532	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv608306	chr7:118868426-119017532	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv429806	chr7:118868766-119085238	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv464696	chr7:118876711-119006416	Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv608307	chr7:118876711-119006416	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv831111	chr7:118884541-119066146	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv464697	chr7:118896639-118969611	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv608308	chr7:118896639-118969611	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv889102	chr7:118904729-119177670	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	esv3443122	chr7:118910030-118910293	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118909800-118910800	Enhancers	Liver	Liver
2	chr7:118910200-118911000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr7:118910200-118911200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr7:118910200-118911400	Enhancers	HMEC	breast
5	chr7:118910200-118911800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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