The 2.0 version of rSNPBase

Variant report

Variant rs73227447
Chromosome Location chr3:112087847-112087848
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112066000-112089800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:112069200-112095400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:112070600-112088800 Weak transcription Brain Cingulate Gyrus brain
4 chr3:112070800-112090600 Weak transcription Brain Hippocampus Middle brain
5 chr3:112077200-112094200 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr3:112077600-112107200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr3:112080000-112088800 Weak transcription Colon Smooth Muscle Colon
8 chr3:112080000-112096000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr3:112081000-112088800 Weak transcription Rectal Smooth Muscle rectum
10 chr3:112081200-112092800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr3:112081400-112088000 Weak transcription Fetal Muscle Trunk muscle
12 chr3:112081400-112091600 Weak transcription Primary T cells from cord blood blood
13 chr3:112082200-112096000 Weak transcription Fetal Stomach stomach
14 chr3:112082600-112094600 Weak transcription Brain Anterior Caudate brain
15 chr3:112083400-112092200 Weak transcription Primary B cells from cord blood blood
16 chr3:112083800-112090600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:112083800-112092200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:112084000-112090600 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr3:112084000-112094800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr3:112084200-112092600 Weak transcription Fetal Kidney kidney
21 chr3:112084400-112091600 Weak transcription Placenta Placenta
22 chr3:112084600-112093200 Weak transcription Fetal Lung lung
23 chr3:112084800-112088800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr3:112084800-112096000 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr3:112084800-112096800 Weak transcription Fetal Muscle Leg muscle
26 chr3:112085000-112089800 Weak transcription H1 Cell Line embryonic stem cell
27 chr3:112085000-112095600 Weak transcription Thymus Thymus
28 chr3:112085400-112096000 Weak transcription H9 Cell Line embryonic stem cell
29 chr3:112085600-112095400 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr3:112085600-112096000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:112085800-112089200 Weak transcription Fetal Brain Female brain
32 chr3:112085800-112091400 Weak transcription Primary B cells from peripheral blood blood
33 chr3:112085800-112091400 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr3:112085800-112091400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:112085800-112092200 Weak transcription Primary hematopoietic stem cells blood
36 chr3:112085800-112096400 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr3:112085800-112096600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr3:112085800-112101400 Weak transcription Aorta Aorta
39 chr3:112086000-112095000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr3:112086000-112095600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:112086200-112088200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:112086200-112091200 Weak transcription Brain Angular Gyrus brain
43 chr3:112086200-112091400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:112086200-112092200 Weak transcription Fetal Thymus thymus
45 chr3:112087000-112088200 Strong transcription Brain Germinal Matrix brain
46 chr3:112087000-112088400 Enhancers Adipose Nuclei Adipose
47 chr3:112087200-112088200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:112087400-112088000 Weak transcription Ovary ovary
49 chr3:112087600-112088000 Genic enhancers Breast Myoepithelial Primary Cells Breast
50 chr3:112087600-112096400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015