Variant report

Variant	rs73246560
Chromosome Location	chr8:67043528-67043529
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:67026208..67027713-chr8:67043472..67045571,2	MCF-7	breast:
2	chr8:67041475..67043623-chr8:67049096..67052044,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11993015	0.86[AFR][1000 genomes]
rs2357669	0.86[AFR][1000 genomes]
rs58929371	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73246531	0.82[AFR][1000 genomes]
rs73246553	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67036800-67044800	Weak transcription	Pancreas	Pancrea
2	chr8:67036800-67044800	Weak transcription	Spleen	Spleen
3	chr8:67036800-67046400	Enhancers	NHLF	lung
4	chr8:67036800-67047000	Enhancers	NHDF-Ad	bronchial
5	chr8:67036800-67047200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:67038800-67043800	Active TSS	Right Ventricle	heart
7	chr8:67039000-67048800	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr8:67039400-67043600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr8:67040200-67043600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:67040200-67043600	Enhancers	Osteobl	bone
11	chr8:67040200-67045400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr8:67040200-67050000	Enhancers	Adipose Nuclei	Adipose
13	chr8:67040400-67046400	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr8:67040800-67044800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr8:67041000-67046200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr8:67041400-67045200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr8:67041600-67044800	Weak transcription	Psoas Muscle	Psoas
18	chr8:67042400-67047200	Enhancers	Fetal Muscle Leg	muscle
19	chr8:67042600-67044000	Enhancers	Left Ventricle	heart
20	chr8:67042600-67069200	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr8:67042800-67043600	Enhancers	Muscle Satellite Cultured Cells	--
22	chr8:67042800-67043600	Weak transcription	Fetal Heart	heart
23	chr8:67042800-67043600	Weak transcription	Right Atrium	heart
24	chr8:67042800-67043800	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr8:67042800-67044000	Enhancers	Liver	Liver
26	chr8:67042800-67044400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr8:67042800-67044600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr8:67042800-67044600	Weak transcription	Fetal Muscle Trunk	muscle
29	chr8:67042800-67044800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr8:67042800-67044800	Enhancers	Monocytes-CD14+_RO01746	blood
31	chr8:67042800-67044800	Weak transcription	NH-A	brain
32	chr8:67042800-67046000	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr8:67043000-67044400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr8:67043000-67044600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr8:67043000-67044600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr8:67043000-67044600	Weak transcription	HMEC	breast
37	chr8:67043000-67044600	Weak transcription	NHEK	skin
38	chr8:67043200-67043600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr8:67043200-67044400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr8:67043400-67043600	Bivalent Enhancer	Primary B cells from cord blood	blood
41	chr8:67043400-67043600	Flanking Active TSS	HSMMtube	muscle
42	chr8:67043400-67044000	ZNF genes & repeats	A549	lung
43	chr8:67043400-67044800	Weak transcription	Placenta	Placenta
44	chr8:67043400-67047400	Genic enhancers	HSMM	muscle

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