Variant report

Variant	rs73249065
Chromosome Location	chr8:59787339-59787340
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs16918743	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890938	chr8:59355053-59809785	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv890940	chr8:59785412-59809785	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59764200-59806400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr8:59771400-59811000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr8:59771600-59794000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr8:59772600-59794400	Weak transcription	Small Intestine	intestine
5	chr8:59773400-59808200	Weak transcription	Thymus	Thymus
6	chr8:59774600-59789600	Weak transcription	Primary T cells from cord blood	blood
7	chr8:59777800-59788200	Weak transcription	Stomach Smooth Muscle	stomach
8	chr8:59777800-59795000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr8:59778200-59789000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr8:59779400-59788800	Weak transcription	HUVEC	blood vessel
11	chr8:59780400-59790000	Weak transcription	HSMM	muscle
12	chr8:59780600-59791600	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr8:59780800-59788800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr8:59781400-59789000	Weak transcription	Fetal Thymus	thymus
15	chr8:59782200-59800200	Weak transcription	Primary hematopoietic stem cells	blood
16	chr8:59782400-59788800	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr8:59783400-59789200	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr8:59784400-59789000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr8:59784400-59792600	Weak transcription	Aorta	Aorta
20	chr8:59785400-59789000	Enhancers	Osteobl	bone
21	chr8:59785400-59792200	Weak transcription	Dnd41	blood
22	chr8:59786000-59788600	Weak transcription	Brain Angular Gyrus	brain
23	chr8:59786200-59787600	Enhancers	Colon Smooth Muscle	Colon
24	chr8:59786200-59789000	Weak transcription	NHLF	lung
25	chr8:59786400-59788200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr8:59786400-59788800	Weak transcription	NHDF-Ad	bronchial
27	chr8:59786400-59789200	Weak transcription	Brain Substantia Nigra	brain
28	chr8:59786600-59788200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr8:59787000-59789000	Weak transcription	Adipose Nuclei	Adipose
30	chr8:59787000-59794600	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr8:59787200-59787600	Enhancers	Breast Myoepithelial Primary Cells	Breast
32	chr8:59787200-59787600	Enhancers	Brain Anterior Caudate	brain

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