Variant report

Variant	rs73251174
Chromosome Location	chr5:114829803-114829804
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73251175	0.95[AFR][1000 genomes]
rs73251194	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916273	chr5:114656592-115089901	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv868915	chr5:114723371-115252527	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
3	nsv830455	chr5:114761542-114938284	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
4	nsv1032234	chr5:114785557-114911527	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114826800-114830000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:114826800-114830400	Weak transcription	Fetal Muscle Leg	muscle
3	chr5:114827000-114830200	Weak transcription	HSMMtube	muscle
4	chr5:114827000-114833000	Weak transcription	Right Ventricle	heart
5	chr5:114827400-114830400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr5:114827600-114830400	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr5:114828200-114830600	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr5:114829600-114830600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr5:114829800-114830200	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr5:114829800-114830200	Enhancers	Brain Angular Gyrus	brain
11	chr5:114829800-114830400	Enhancers	H9 Cell Line	embryonic stem cell
12	chr5:114829800-114830400	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr5:114829800-114830400	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr5:114829800-114830400	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr5:114829800-114830400	Enhancers	Fetal Brain Male	brain
16	chr5:114829800-114830600	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr5:114829800-114830600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr5:114829800-114830600	Enhancers	Stomach Smooth Muscle	stomach
19	chr5:114829800-114830800	Flanking Active TSS	GM12878-XiMat	blood
20	chr5:114829800-114830800	Enhancers	HSMM	muscle
21	chr5:114829800-114831000	Enhancers	Fetal Stomach	stomach
22	chr5:114829800-114831000	Enhancers	NH-A	brain
23	chr5:114829800-114831200	Enhancers	NHDF-Ad	bronchial

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