Variant report

Variant	rs73256530
Chromosome Location	chr4:21711104-21711105
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73256522	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73256576	1.00[AMR][1000 genomes]
rs73256593	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21710200-21711600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:21710200-21711600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr4:21710400-21711600	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr4:21710400-21711600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr4:21710400-21711600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr4:21710400-21711800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr4:21710800-21711600	Weak transcription	Colon Smooth Muscle	Colon
8	chr4:21711000-21712200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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