Variant report

Variant	rs73264754
Chromosome Location	chr5:114984591-114984592
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs56774716	0.87[AFR][1000 genomes]
rs57651143	0.87[AFR][1000 genomes]
rs57806423	0.87[AFR][1000 genomes]
rs58575550	0.87[AFR][1000 genomes]
rs59498080	0.87[AFR][1000 genomes]
rs60230535	0.87[AFR][1000 genomes]
rs60326995	0.87[AFR][1000 genomes]
rs73260539	0.83[AFR][1000 genomes]
rs73260540	0.87[AFR][1000 genomes]
rs73260542	0.87[AFR][1000 genomes]
rs73260543	0.87[AFR][1000 genomes]
rs73260545	0.87[AFR][1000 genomes]
rs73260548	0.87[AFR][1000 genomes]
rs73260552	0.87[AFR][1000 genomes]
rs73260555	0.87[AFR][1000 genomes]
rs73260556	0.87[AFR][1000 genomes]
rs73260562	0.87[AFR][1000 genomes]
rs73260563	0.87[AFR][1000 genomes]
rs73260565	0.87[AFR][1000 genomes]
rs73260567	0.87[AFR][1000 genomes]
rs73260572	0.87[AFR][1000 genomes]
rs73260574	0.87[AFR][1000 genomes]
rs73260579	0.87[AFR][1000 genomes]
rs73260580	0.87[AFR][1000 genomes]
rs73260583	0.87[AFR][1000 genomes]
rs73260584	0.87[AFR][1000 genomes]
rs73260585	0.87[AFR][1000 genomes]
rs73260586	0.87[AFR][1000 genomes]
rs73264716	0.87[AFR][1000 genomes]
rs73264723	0.87[AFR][1000 genomes]
rs73264732	0.87[AFR][1000 genomes]
rs73264737	1.00[AFR][1000 genomes]
rs73264767	1.00[AFR][1000 genomes]
rs7341161	0.87[AFR][1000 genomes]
rs7722595	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916273	chr5:114656592-115089901	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv868915	chr5:114723371-115252527	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114983600-114985200	Enhancers	Adipose Nuclei	Adipose
2	chr5:114983600-114985200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr5:114983600-114985400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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