Variant report

Variant	rs73265384
Chromosome Location	chr8:69169022-69169023
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs56802550	1.00[EUR][1000 genomes]
rs60860526	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3331644	chr8:68806705-69189171	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1028889	chr8:69026806-69308725	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69165200-69172400	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr8:69167000-69173600	Weak transcription	Esophagus	oesophagus
3	chr8:69168200-69169800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr8:69168200-69170400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr8:69168200-69170400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:69168200-69170400	Enhancers	HMEC	breast
7	chr8:69168200-69170600	Enhancers	Muscle Satellite Cultured Cells	--
8	chr8:69168200-69170600	Enhancers	NHDF-Ad	bronchial
9	chr8:69168400-69169600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:69168400-69169800	Enhancers	HSMM	muscle
11	chr8:69168400-69172200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:69168600-69169400	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr8:69168600-69169400	Enhancers	NHLF	lung
14	chr8:69168600-69170000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr8:69168600-69170200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr8:69168600-69170200	Enhancers	Aorta	Aorta
17	chr8:69168600-69170200	Enhancers	Osteobl	bone
18	chr8:69168600-69171400	Enhancers	Adipose Nuclei	Adipose
19	chr8:69168800-69169400	Enhancers	Primary monocytes fromperipheralblood	blood
20	chr8:69168800-69170000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr8:69168800-69170000	Enhancers	Right Atrium	heart
22	chr8:69168800-69170200	Enhancers	HSMMtube	muscle
23	chr8:69169000-69169200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr8:69169000-69169200	Enhancers	A549	lung
25	chr8:69169000-69169400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr8:69169000-69169400	Enhancers	NH-A	brain
27	chr8:69169000-69169800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr8:69169000-69169800	Enhancers	Ovary	ovary
29	chr8:69169000-69170200	Enhancers	NHEK	skin
30	chr8:69169000-69171600	Weak transcription	Monocytes-CD14+_RO01746	blood

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