The 2.0 version of rSNPBase

Variant report

Variant rs73266217
Chromosome Location chr5:146933941-146933942
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146931200-146934000 Enhancers Fetal Stomach stomach
2 chr5:146932000-146935000 Enhancers Placenta Amnion Placenta Amnion
3 chr5:146932200-146935400 Enhancers Fetal Muscle Leg muscle
4 chr5:146932400-146934200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:146932400-146934200 Enhancers Fetal Brain Male brain
6 chr5:146932600-146934000 Weak transcription Colonic Mucosa Colon
7 chr5:146932600-146934000 Enhancers Fetal Muscle Trunk muscle
8 chr5:146932600-146934000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr5:146932800-146934000 Weak transcription Colon Smooth Muscle Colon
10 chr5:146933200-146934400 Enhancers Cortex derived primary cultured neurospheres brain
11 chr5:146933200-146934400 Active TSS Duodenum Smooth Muscle Duodenum
12 chr5:146933200-146934600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr5:146933200-146934800 Enhancers Fetal Intestine Small intestine
14 chr5:146933400-146934000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr5:146933400-146934000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:146933400-146934000 Active TSS NHLF lung
17 chr5:146933400-146934400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr5:146933400-146934400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr5:146933400-146934600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr5:146933400-146934600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:146933400-146934800 Enhancers NH-A brain
22 chr5:146933600-146934000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr5:146933600-146934000 Weak transcription Left Ventricle heart
24 chr5:146933600-146934000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
25 chr5:146933600-146934000 Active TSS Stomach Smooth Muscle stomach
26 chr5:146933600-146934200 Active TSS Breast Myoepithelial Primary Cells Breast
27 chr5:146933600-146934200 Active TSS Rectal Smooth Muscle rectum
28 chr5:146933600-146934400 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr5:146933600-146934400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:146933600-146934400 Flanking Active TSS Muscle Satellite Cultured Cells --
31 chr5:146933600-146934400 Flanking Active TSS Fetal Lung lung
32 chr5:146933600-146934400 Active TSS Ovary ovary
33 chr5:146933600-146934400 Active TSS Right Atrium heart
34 chr5:146933600-146934400 Enhancers NHEK skin
35 chr5:146933600-146934600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:146933800-146934000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:146933800-146934000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr5:146933800-146934000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr5:146933800-146934000 Active TSS Fetal Kidney kidney
40 chr5:146933800-146934000 Active TSS HSMMtube muscle
41 chr5:146933800-146934000 Active TSS NHDF-Ad bronchial
42 chr5:146933800-146934200 Enhancers HUES6 Cell Line embryonic stem cell
43 chr5:146933800-146934200 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr5:146933800-146934200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:146933800-146934200 Active TSS Brain Cingulate Gyrus brain
46 chr5:146933800-146934200 Enhancers Brain Inferior Temporal Lobe brain
47 chr5:146933800-146934200 Flanking Active TSS Fetal Brain Female brain
48 chr5:146933800-146934200 Active TSS Pancreatic Islets Pancreatic Islet
49 chr5:146933800-146934200 Enhancers Skeletal Muscle Male skeletal muscle
50 chr5:146933800-146934200 Flanking Active TSS HSMM muscle

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Last update: Aug 31, 2015