Variant report

Variant	rs732668
Chromosome Location	chr20:15876290-15876291
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73597716	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869328	chr20:15325423-16213898	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv833929	chr20:15765372-15977337	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3447866	chr20:15799286-16115291	Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:15874600-15876800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr20:15875400-15877200	Enhancers	Primary hematopoietic stem cells	blood
3	chr20:15875600-15876400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr20:15875600-15876400	Enhancers	Muscle Satellite Cultured Cells	--
5	chr20:15875600-15876600	Enhancers	HSMM	muscle
6	chr20:15875600-15877000	Enhancers	Primary T cells from cord blood	blood
7	chr20:15875600-15877200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr20:15875800-15876600	Weak transcription	Primary B cells from cord blood	blood
9	chr20:15875800-15877200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr20:15876000-15876400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr20:15876000-15876600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
12	chr20:15876000-15877000	Enhancers	Primary B cells from peripheral blood	blood
13	chr20:15876000-15877200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr20:15876200-15876400	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr20:15876200-15876800	Bivalent Enhancer	Dnd41	blood
16	chr20:15876200-15876800	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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