Variant report

Variant	rs73269080
Chromosome Location	chr8:64543171-64543172
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6994952	1.00[AMR][1000 genomes]
rs73269072	1.00[AMR][1000 genomes]
rs73270941	1.00[AMR][1000 genomes]
rs73270950	1.00[AMR][1000 genomes]
rs73270961	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64540400-64545200	Weak transcription	Brain Germinal Matrix	brain
2	chr8:64540800-64544000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:64541800-64545400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr8:64542200-64543400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr8:64543000-64543400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr8:64543000-64545800	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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