Variant report

Variant	rs73269138
Chromosome Location	chr8:95812418-95812419
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs58615978	1.00[EUR][1000 genomes]
rs58621412	1.00[EUR][1000 genomes]
rs6471458	1.00[EUR][1000 genomes]
rs7003975	1.00[EUR][1000 genomes]
rs73265267	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73267120	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73269135	1.00[EUR][1000 genomes]
rs7818717	1.00[EUR][1000 genomes]
rs7819222	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7828419	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017301	chr8:95273503-96248352	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv539680	chr8:95273503-96248352	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv532338	chr8:95296118-95971825	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:95786200-95812800	Weak transcription	Gastric	stomach
2	chr8:95799200-95814400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr8:95810000-95814000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:95810200-95818800	Weak transcription	K562	blood
5	chr8:95810200-95819600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr8:95812200-95813000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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