Variant report

Variant	rs73271272
Chromosome Location	chr8:62656404-62656405
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:62651538..62653793-chr8:62655127..62656703,2	MCF-7	breast:
2	chr8:62653569..62658048-chr8:62660700..62664543,4	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs73263143	1.00[AFR][1000 genomes]
rs73267211	1.00[AMR][1000 genomes]
rs73267217	1.00[AMR][1000 genomes]
rs73267220	1.00[AMR][1000 genomes]
rs73267238	1.00[AMR][1000 genomes]
rs73267240	1.00[AMR][1000 genomes]
rs73267292	1.00[AMR][1000 genomes]
rs73267296	1.00[AMR][1000 genomes]
rs73269207	1.00[AMR][1000 genomes]
rs73269256	1.00[AMR][1000 genomes]
rs73269263	1.00[AMR][1000 genomes]
rs73269267	1.00[AMR][1000 genomes]
rs73269273	1.00[AMR][1000 genomes]
rs73269299	1.00[AMR][1000 genomes]
rs73271215	1.00[AMR][1000 genomes]
rs73271226	1.00[AMR][1000 genomes]
rs73271232	1.00[AMR][1000 genomes]
rs73271246	1.00[AMR][1000 genomes]
rs73271250	1.00[AMR][1000 genomes]
rs73271257	1.00[AMR][1000 genomes]
rs73271263	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024432	chr8:62086247-62898782	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv932198	chr8:62336705-62914562	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	esv2761430	chr8:62517980-62873803	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	nsv1015216	chr8:62517980-62873803	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:62654200-62657800	Weak transcription	A549	lung
2	chr8:62654800-62660600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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