Variant report

Variant	rs73271374
Chromosome Location	chr5:151406592-151406593
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs58154828	1.00[AFR][1000 genomes]
rs73271315	1.00[AFR][1000 genomes]
rs73273208	1.00[AFR][1000 genomes]
rs73273244	1.00[AFR][1000 genomes]
rs73273271	1.00[AFR][1000 genomes]
rs73287862	1.00[AFR][1000 genomes]
rs7341147	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020223	chr5:151383539-151417923	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151404800-151407200	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr5:151405000-151407600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr5:151405200-151407000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr5:151405200-151407000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
5	chr5:151405200-151407000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr5:151405200-151407000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr5:151405200-151407200	Enhancers	Primary T cells fromperipheralblood	blood
8	chr5:151405200-151407800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr5:151405400-151407000	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr5:151405600-151406600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
11	chr5:151405800-151406600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
12	chr5:151406000-151407200	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr5:151406200-151407200	ZNF genes & repeats	Primary B cells from peripheral blood	blood
14	chr5:151406400-151406600	Enhancers	Primary T cells from cord blood	blood
15	chr5:151406400-151406800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr5:151406400-151407000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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