Variant report

Variant	rs73274619
Chromosome Location	chr14:63918994-63918995
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:63857974..63860690-chr14:63917148..63919988,2	MCF-7	breast:
2	chr14:63916512..63919092-chr14:63921738..63924615,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10147174	1.00[AMR][1000 genomes]
rs1255719	1.00[AMR][1000 genomes]
rs73274613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73274694	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527251	chr14:63400786-64068806	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv530774	chr14:63591348-64029881	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
4	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63851200-63922000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr14:63854800-63922400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr14:63900600-63921800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:63905000-63921600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr14:63905000-63925800	Weak transcription	Stomach Mucosa	stomach
6	chr14:63905200-63919000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr14:63905200-63919200	Weak transcription	K562	blood
8	chr14:63905200-63919600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr14:63905200-63937600	Weak transcription	Fetal Intestine Small	intestine
10	chr14:63905400-63921600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr14:63905400-63926400	Weak transcription	Aorta	Aorta
12	chr14:63905400-63937400	Weak transcription	HUVEC	blood vessel
13	chr14:63905600-63919000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr14:63905600-63919000	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr14:63905600-63919200	Weak transcription	NH-A	brain
16	chr14:63905600-63919600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr14:63905600-63920200	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr14:63905600-63921600	Weak transcription	Duodenum Mucosa	Duodenum
19	chr14:63905600-63921600	Weak transcription	NHDF-Ad	bronchial
20	chr14:63905600-63927000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr14:63905800-63922000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr14:63906000-63919200	Weak transcription	Primary T helper cells PMA-I stimulated	--
23	chr14:63906000-63921400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr14:63906000-63921400	Weak transcription	Adipose Nuclei	Adipose
25	chr14:63906000-63934600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr14:63906800-63919000	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr14:63906800-63921200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr14:63906800-63924400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
29	chr14:63907000-63921600	Weak transcription	Gastric	stomach
30	chr14:63907000-63921600	Weak transcription	Spleen	Spleen
31	chr14:63907000-63924800	Weak transcription	Duodenum Smooth Muscle	Duodenum
32	chr14:63907000-63935000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr14:63907200-63919200	Weak transcription	Liver	Liver
34	chr14:63907200-63919400	Weak transcription	Colon Smooth Muscle	Colon
35	chr14:63907200-63921600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr14:63907200-63926000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
37	chr14:63907400-63919800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr14:63907400-63921200	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr14:63907400-63921600	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr14:63907400-63921800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr14:63907400-63924200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
42	chr14:63910800-63919400	Weak transcription	Brain Substantia Nigra	brain
43	chr14:63910800-63920800	Weak transcription	Brain Anterior Caudate	brain
44	chr14:63911000-63921600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr14:63911000-63921600	Weak transcription	Esophagus	oesophagus
46	chr14:63911000-63921600	Weak transcription	Left Ventricle	heart
47	chr14:63911000-63921600	Weak transcription	Lung	lung
48	chr14:63911000-63921600	Weak transcription	Pancreas	Pancrea
49	chr14:63911200-63921400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr14:63911200-63923800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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