Variant report

Variant	rs73276348
Chromosome Location	chr12:42297302-42297303
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17576374	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899043	chr12:42058138-42313665	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv899044	chr12:42058138-42321161	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:42294800-42301000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr12:42295200-42299200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr12:42295800-42299800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:42296400-42297600	Enhancers	HUVEC	blood vessel
5	chr12:42296800-42297600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr12:42297000-42297400	Enhancers	Lung	lung
7	chr12:42297000-42297600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr12:42297200-42301200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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