Variant report

Variant	rs73281231
Chromosome Location	chr7:14312420-14312421
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10214938	1.00[EUR][1000 genomes]
rs11975701	1.00[EUR][1000 genomes]
rs11982440	1.00[EUR][1000 genomes]
rs16878125	1.00[EUR][1000 genomes]
rs73263911	1.00[EUR][1000 genomes]
rs73263942	1.00[EUR][1000 genomes]
rs73281248	1.00[EUR][1000 genomes]
rs73679706	1.00[EUR][1000 genomes]
rs73679719	1.00[EUR][1000 genomes]
rs7793134	1.00[EUR][1000 genomes]
rs7803632	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14308600-14312600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:14309000-14313800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:14311600-14316800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr7:14311600-14318200	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr7:14312000-14314400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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